Index _ | A | B | C | D | E | F | G | H | I | K | L | M | N | O | P | Q | R | S | T | U | V | W | X _ __version__ (in module soxspipe.__version__) A add_data_to_placeholder_images() (soxspipe.commonutils.subtract_sky.soxspipe.commonutils.subtract_sky.subtract_sky.subtract_sky method) (soxspipe.commonutils.subtract_sky.subtract_sky method) add_recipe_logger() (in module soxspipe.commonutils.toolkit) add_snr_efficiency_qcs() (in module soxspipe.commonutils.toolkit) adjust_tilt() (soxspipe.commonutils.subtract_sky.soxspipe.commonutils.subtract_sky.subtract_sky.subtract_sky method) (soxspipe.commonutils.subtract_sky.subtract_sky method) average_combine() (soxspipe.commonutils.combiner.Combiner method) B base_recipe (class in soxspipe.recipes.base_recipe) build_sof_files() (soxspipe.commonutils.data_organiser.data_organiser method) (soxspipe.commonutils.data_organiser.soxspipe.commonutils.data_organiser.data_organiser.data_organiser method) C calculate_residuals() (soxspipe.commonutils.create_dispersion_map.create_dispersion_map method) (soxspipe.commonutils.create_dispersion_map.soxspipe.commonutils.create_dispersion_map.create_dispersion_map.create_dispersion_map method) (soxspipe.commonutils.detect_continuum.detect_continuum method) (soxspipe.commonutils.detect_continuum.soxspipe.commonutils.detect_continuum.detect_continuum.detect_continuum method) (soxspipe.commonutils.detect_order_edges.detect_order_edges method) (soxspipe.commonutils.detect_order_edges.soxspipe.commonutils.detect_order_edges.detect_order_edges.detect_order_edges method) (soxspipe.commonutils.subtract_sky.soxspipe.commonutils.subtract_sky.subtract_sky.subtract_sky method) (soxspipe.commonutils.subtract_sky.subtract_sky method) calculate_rolling_snr() (in module soxspipe.commonutils.toolkit) calibrate() (soxspipe.commonutils.flux_calibration.flux_calibration method) calibrate_frame_set() (soxspipe.recipes.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_mflat.soxspipe.recipes.soxs_mflat.soxs_mflat.soxs_mflat method) chebyshev_order_wavelength_polynomials (class in soxspipe.commonutils.polynomials) chebyshev_order_xy_polynomials (class in soxspipe.commonutils.polynomials) chebyshev_xy_polynomial (class in soxspipe.commonutils.polynomials) clean_up() (soxspipe.recipes.base_recipe.base_recipe method) (soxspipe.recipes.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_disp_solution.soxspipe.recipes.soxs_disp_solution.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_mbias.soxs_mbias method) (soxspipe.recipes.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mdark.soxspipe.recipes.soxs_mdark.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_mflat.soxspipe.recipes.soxs_mflat.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_nod.soxspipe.recipes.soxs_nod.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_offset.soxs_offset method) (soxspipe.recipes.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_order_centres.soxspipe.recipes.soxs_order_centres.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_spatial_solution.soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_stare.soxspipe.recipes.soxs_stare.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_straighten.soxs_straighten method) (soxspipe.recipes.soxs_straighten.soxspipe.recipes.soxs_straighten.soxs_straighten.soxs_straighten method) clip_and_stack() (soxspipe.recipes.base_recipe.base_recipe method) (soxspipe.recipes.base_recipe.soxspipe.recipes.base_recipe.base_recipe method) (soxspipe.recipes.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_disp_solution.soxspipe.recipes.soxs_disp_solution.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_mbias.soxs_mbias method) (soxspipe.recipes.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mdark.soxspipe.recipes.soxs_mdark.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_mflat.soxspipe.recipes.soxs_mflat.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_nod.soxspipe.recipes.soxs_nod.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_offset.soxs_offset method) (soxspipe.recipes.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_order_centres.soxspipe.recipes.soxs_order_centres.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_spatial_solution.soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_stare.soxspipe.recipes.soxs_stare.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_straighten.soxs_straighten method) (soxspipe.recipes.soxs_straighten.soxspipe.recipes.soxs_straighten.soxs_straighten.soxs_straighten method) clip_object_slit_positions() (soxspipe.commonutils.subtract_sky.soxspipe.commonutils.subtract_sky.subtract_sky.subtract_sky method) (soxspipe.commonutils.subtract_sky.subtract_sky method) close() (soxspipe.commonutils.data_organiser.data_organiser method) (soxspipe.commonutils.data_organiser.soxspipe.commonutils.data_organiser.data_organiser.data_organiser method) Combiner (class in soxspipe.commonutils.combiner) convert_and_fit() (soxspipe.commonutils.create_dispersion_map.create_dispersion_map method) (soxspipe.commonutils.create_dispersion_map.soxspipe.commonutils.create_dispersion_map.create_dispersion_map.create_dispersion_map method) create_background_image() (soxspipe.commonutils.subtract_background.subtract_background method) create_cross_dispersion_slices() (in module soxspipe.commonutils.horne_extraction) create_dispersion_map (class in soxspipe.commonutils.create_dispersion_map) create_dispersion_solution_grid_lines_for_plot() (in module soxspipe.commonutils.toolkit) create_new_static_line_list() (soxspipe.commonutils.create_dispersion_map.create_dispersion_map method) (soxspipe.commonutils.create_dispersion_map.soxspipe.commonutils.create_dispersion_map.create_dispersion_map.create_dispersion_map method) create_pixel_arrays() (soxspipe.commonutils.detect_continuum.detect_continuum method) (soxspipe.commonutils.detect_continuum.soxspipe.commonutils.detect_continuum.detect_continuum.detect_continuum method) create_placeholder_images() (soxspipe.commonutils.create_dispersion_map.create_dispersion_map method) (soxspipe.commonutils.create_dispersion_map.soxspipe.commonutils.create_dispersion_map.create_dispersion_map.create_dispersion_map method) (soxspipe.commonutils.subtract_sky.soxspipe.commonutils.subtract_sky.subtract_sky.subtract_sky method) (soxspipe.commonutils.subtract_sky.subtract_sky method) create_supplementary_file_dictionary() (soxspipe.commonutils.set_of_files.set_of_files method) (soxspipe.commonutils.set_of_files.soxspipe.commonutils.set_of_files.set_of_files.set_of_files method) cross_dispersion_flux_normaliser() (soxspipe.commonutils.subtract_sky.soxspipe.commonutils.subtract_sky.subtract_sky.subtract_sky method) (soxspipe.commonutils.subtract_sky.subtract_sky method) cut_image_slice() (in module soxspipe.commonutils.toolkit) D data_organiser (class in soxspipe.commonutils.data_organiser) detect_continuum (class in soxspipe.commonutils.detect_continuum) detect_order_edges (class in soxspipe.commonutils.detect_order_edges) detect_pinhole_arc_lines() (soxspipe.commonutils.create_dispersion_map.create_dispersion_map method) (soxspipe.commonutils.create_dispersion_map.soxspipe.commonutils.create_dispersion_map.create_dispersion_map.create_dispersion_map method) detector_lookup (class in soxspipe.commonutils.detector_lookup) determine_lower_upper_edge_pixel_positions() (soxspipe.commonutils.detect_order_edges.detect_order_edges method) (soxspipe.commonutils.detect_order_edges.soxspipe.commonutils.detect_order_edges.detect_order_edges.detect_order_edges method) determine_order_flux_threshold() (soxspipe.commonutils.detect_order_edges.detect_order_edges method) (soxspipe.commonutils.detect_order_edges.soxspipe.commonutils.detect_order_edges.detect_order_edges.detect_order_edges method) determine_residual_floor() (soxspipe.commonutils.subtract_sky.soxspipe.commonutils.subtract_sky.subtract_sky.subtract_sky method) (soxspipe.commonutils.subtract_sky.subtract_sky method) detrend() (soxspipe.recipes.base_recipe.base_recipe method) (soxspipe.recipes.base_recipe.soxspipe.recipes.base_recipe.base_recipe method) (soxspipe.recipes.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_disp_solution.soxspipe.recipes.soxs_disp_solution.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_mbias.soxs_mbias method) (soxspipe.recipes.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mdark.soxspipe.recipes.soxs_mdark.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_mflat.soxspipe.recipes.soxs_mflat.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_nod.soxspipe.recipes.soxs_nod.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_offset.soxs_offset method) (soxspipe.recipes.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_order_centres.soxspipe.recipes.soxs_order_centres.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_spatial_solution.soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_stare.soxspipe.recipes.soxs_stare.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_straighten.soxs_straighten method) (soxspipe.recipes.soxs_straighten.soxspipe.recipes.soxs_straighten.soxs_straighten.soxs_straighten method) dispersion_map_to_pixel_arrays() (in module soxspipe.commonutils.dispersion_map_to_pixel_arrays) E extinction_correction_factor() (in module soxspipe.commonutils.toolkit) extract() (soxspipe.commonutils.horne_extraction.horne_extraction method) (soxspipe.commonutils.horne_extraction.soxspipe.commonutils.horne_extraction.horne_extraction.horne_extraction method) extract_single_order() (in module soxspipe.commonutils.horne_extraction) F filenamer() (in module soxspipe.commonutils.filenamer) filter() (soxspipe.commonutils.toolkit.MaxFilter method) find_largest_cluster_center() (in module soxspipe.commonutils.create_dispersion_map) find_uvb_overlap_order_and_scale() (soxspipe.recipes.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_mflat.soxspipe.recipes.soxs_mflat.soxs_mflat.soxs_mflat method) fit_1d_gaussian_to_slices() (soxspipe.commonutils.detect_continuum.detect_continuum method) (soxspipe.commonutils.detect_continuum.soxspipe.commonutils.detect_continuum.detect_continuum.detect_continuum method) fit_bspline_curve_to_sky() (soxspipe.commonutils.subtract_sky.soxspipe.commonutils.subtract_sky.subtract_sky.subtract_sky method) (soxspipe.commonutils.subtract_sky.subtract_sky method) fit_global_polynomial() (soxspipe.commonutils.detect_continuum.detect_continuum method) (soxspipe.commonutils.detect_continuum.soxspipe.commonutils.detect_continuum.detect_continuum.detect_continuum method) (soxspipe.commonutils.detect_order_edges.detect_order_edges method) (soxspipe.commonutils.detect_order_edges.soxspipe.commonutils.detect_order_edges.detect_order_edges.detect_order_edges method) fit_order_polynomial() (soxspipe.commonutils.detect_continuum.detect_continuum method) (soxspipe.commonutils.detect_continuum.soxspipe.commonutils.detect_continuum.detect_continuum.detect_continuum method) (soxspipe.commonutils.detect_order_edges.detect_order_edges method) (soxspipe.commonutils.detect_order_edges.soxspipe.commonutils.detect_order_edges.detect_order_edges.detect_order_edges method) fit_polynomials() (soxspipe.commonutils.create_dispersion_map.create_dispersion_map method) (soxspipe.commonutils.create_dispersion_map.soxspipe.commonutils.create_dispersion_map.create_dispersion_map.create_dispersion_map method) flag_poor_data() (soxspipe.recipes.base_recipe.base_recipe method) (soxspipe.recipes.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_disp_solution.soxspipe.recipes.soxs_disp_solution.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_mbias.soxs_mbias method) (soxspipe.recipes.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mdark.soxspipe.recipes.soxs_mdark.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_mflat.soxspipe.recipes.soxs_mflat.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_nod.soxspipe.recipes.soxs_nod.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_offset.soxs_offset method) (soxspipe.recipes.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_order_centres.soxspipe.recipes.soxs_order_centres.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_spatial_solution.soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_stare.soxspipe.recipes.soxs_stare.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_straighten.soxs_straighten method) (soxspipe.recipes.soxs_straighten.soxspipe.recipes.soxs_straighten.soxs_straighten.soxs_straighten method) flux_calibration (class in soxspipe.commonutils.flux_calibration) frame_to_32() (in module soxspipe.commonutils.toolkit) G generic_quality_checks() (in module soxspipe.commonutils.toolkit) get() (soxspipe.commonutils.create_dispersion_map.create_dispersion_map method) (soxspipe.commonutils.create_dispersion_map.soxspipe.commonutils.create_dispersion_map.create_dispersion_map.create_dispersion_map method) (soxspipe.commonutils.detect_continuum.detect_continuum method) (soxspipe.commonutils.detect_continuum.soxspipe.commonutils.detect_continuum.detect_continuum.detect_continuum method) (soxspipe.commonutils.detect_order_edges.detect_order_edges method) (soxspipe.commonutils.detect_order_edges.soxspipe.commonutils.detect_order_edges.detect_order_edges.detect_order_edges method) (soxspipe.commonutils.detector_lookup.detector_lookup method) (soxspipe.commonutils.keyword_lookup.keyword_lookup method) (soxspipe.commonutils.response_function.response_function method) (soxspipe.commonutils.response_function.soxspipe.commonutils.response_function.response_function.response_function method) (soxspipe.commonutils.set_of_files.set_of_files method) (soxspipe.commonutils.set_of_files.soxspipe.commonutils.set_of_files.set_of_files.set_of_files method) get_cached_coeffs() (in module soxspipe.commonutils.dispersion_map_to_pixel_arrays) get_calibration_lamp() (in module soxspipe.commonutils.toolkit) get_calibrations_path() (in module soxspipe.commonutils.toolkit) get_incomplete_raw_frames_set() (soxspipe.commonutils.data_organiser.data_organiser method) (soxspipe.commonutils.data_organiser.soxspipe.commonutils.data_organiser.data_organiser.data_organiser method) get_over_sampled_sky_from_order() (soxspipe.commonutils.subtract_sky.soxspipe.commonutils.subtract_sky.subtract_sky.subtract_sky method) (soxspipe.commonutils.subtract_sky.subtract_sky method) get_predicted_line_list() (soxspipe.commonutils.create_dispersion_map.create_dispersion_map method) (soxspipe.commonutils.create_dispersion_map.soxspipe.commonutils.create_dispersion_map.create_dispersion_map.create_dispersion_map method) get_project_root() (soxspipe.utKit.utKit method) get_raw_frames_and_groups() (soxspipe.commonutils.data_organiser.data_organiser method) (soxspipe.commonutils.data_organiser.soxspipe.commonutils.data_organiser.data_organiser.data_organiser method) get_recipe_settings() (soxspipe.recipes.base_recipe.base_recipe method) (soxspipe.recipes.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_disp_solution.soxspipe.recipes.soxs_disp_solution.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_mbias.soxs_mbias method) (soxspipe.recipes.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mdark.soxspipe.recipes.soxs_mdark.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_mflat.soxspipe.recipes.soxs_mflat.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_nod.soxspipe.recipes.soxs_nod.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_offset.soxs_offset method) (soxspipe.recipes.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_order_centres.soxspipe.recipes.soxs_order_centres.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_spatial_solution.soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_stare.soxspipe.recipes.soxs_stare.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_straighten.soxs_straighten method) (soxspipe.recipes.soxs_straighten.soxspipe.recipes.soxs_straighten.soxs_straighten.soxs_straighten method) getpackagepath() (in module soxspipe.commonutils.getpackagepath) H horne_extraction (class in soxspipe.commonutils.horne_extraction) I ImageFileCollection (class in soxspipe.commonutils.set_of_files) K keyword_lookup (class in soxspipe.commonutils.keyword_lookup) L list_obs() (soxspipe.commonutils.data_organiser.data_organiser method) (soxspipe.commonutils.data_organiser.soxspipe.commonutils.data_organiser.data_organiser.data_organiser method) list_raw() (soxspipe.commonutils.data_organiser.data_organiser method) (soxspipe.commonutils.data_organiser.soxspipe.commonutils.data_organiser.data_organiser.data_organiser method) list_sofs() (soxspipe.commonutils.data_organiser.data_organiser method) (soxspipe.commonutils.data_organiser.soxspipe.commonutils.data_organiser.data_organiser.data_organiser method) M main() (in module soxspipe.cl_utils) map_to_image() (soxspipe.commonutils.create_dispersion_map.create_dispersion_map method) (soxspipe.commonutils.create_dispersion_map.soxspipe.commonutils.create_dispersion_map.create_dispersion_map.create_dispersion_map method) mask_low_sens_pixels() (soxspipe.recipes.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_mflat.soxspipe.recipes.soxs_mflat.soxs_mflat.soxs_mflat method) mask_order_locations() (soxspipe.commonutils.subtract_background.subtract_background method) MaxFilter (class in soxspipe.commonutils.toolkit) measure_line_position() (in module soxspipe.commonutils.create_dispersion_map) merge_extracted_orders() (soxspipe.commonutils.horne_extraction.horne_extraction method) (soxspipe.commonutils.horne_extraction.soxspipe.commonutils.horne_extraction.horne_extraction.horne_extraction method) module soxspipe soxspipe.__version__ soxspipe.cl_utils soxspipe.commonutils soxspipe.commonutils.combiner soxspipe.commonutils.create_dispersion_map soxspipe.commonutils.data_organiser soxspipe.commonutils.detect_continuum soxspipe.commonutils.detect_order_edges soxspipe.commonutils.detector_lookup soxspipe.commonutils.dispersion_map_to_pixel_arrays soxspipe.commonutils.filenamer soxspipe.commonutils.flux_calibration soxspipe.commonutils.getpackagepath soxspipe.commonutils.horne_extraction soxspipe.commonutils.keyword_lookup soxspipe.commonutils.polynomials soxspipe.commonutils.reducer soxspipe.commonutils.response_function soxspipe.commonutils.set_of_files soxspipe.commonutils.subtract_background soxspipe.commonutils.subtract_sky soxspipe.commonutils.toolkit soxspipe.commonutils.uncompress soxspipe.recipes soxspipe.recipes.base_recipe soxspipe.recipes.soxs_disp_solution soxspipe.recipes.soxs_mbias soxspipe.recipes.soxs_mdark soxspipe.recipes.soxs_mflat soxspipe.recipes.soxs_nod soxspipe.recipes.soxs_offset soxspipe.recipes.soxs_order_centres soxspipe.recipes.soxs_spatial_solution soxspipe.recipes.soxs_stare soxspipe.recipes.soxs_straighten soxspipe.utKit N nearest_neighbour() (in module soxspipe.recipes.soxs_mflat) normalise_flats() (soxspipe.recipes.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_mflat.soxspipe.recipes.soxs_mflat.soxs_mflat.soxs_mflat method) O order_to_image() (soxspipe.commonutils.create_dispersion_map.create_dispersion_map method) (soxspipe.commonutils.create_dispersion_map.soxspipe.commonutils.create_dispersion_map.create_dispersion_map.create_dispersion_map method) P parameterTuning() (in module soxspipe.recipes.soxs_disp_solution) (in module soxspipe.recipes.soxs_order_centres) (in module soxspipe.recipes.soxs_spatial_solution) plot_extracted_spectrum_qc() (soxspipe.commonutils.horne_extraction.horne_extraction method) (soxspipe.commonutils.horne_extraction.soxspipe.commonutils.horne_extraction.horne_extraction.horne_extraction method) plot_image_comparison() (soxspipe.commonutils.subtract_sky.soxspipe.commonutils.subtract_sky.subtract_sky.subtract_sky method) (soxspipe.commonutils.subtract_sky.subtract_sky method) plot_merged_spectrum_qc() (in module soxspipe.commonutils.toolkit) plot_order_skymodel_fitting_quicklook() (soxspipe.commonutils.subtract_sky.soxspipe.commonutils.subtract_sky.subtract_sky.subtract_sky method) (soxspipe.commonutils.subtract_sky.subtract_sky method) plot_response_curve() (soxspipe.commonutils.response_function.response_function method) (soxspipe.commonutils.response_function.soxspipe.commonutils.response_function.response_function.response_function method) plot_results() (soxspipe.commonutils.detect_continuum.detect_continuum method) (soxspipe.commonutils.detect_continuum.soxspipe.commonutils.detect_continuum.detect_continuum.detect_continuum method) (soxspipe.commonutils.detect_order_edges.detect_order_edges method) (soxspipe.commonutils.detect_order_edges.soxspipe.commonutils.detect_order_edges.detect_order_edges.detect_order_edges method) plot_sky_sampling() (soxspipe.commonutils.subtract_sky.soxspipe.commonutils.subtract_sky.subtract_sky.subtract_sky method) (soxspipe.commonutils.subtract_sky.subtract_sky method) poly() (soxspipe.commonutils.polynomials.chebyshev_order_wavelength_polynomials method) (soxspipe.commonutils.polynomials.chebyshev_order_xy_polynomials method) (soxspipe.commonutils.polynomials.chebyshev_xy_polynomial method) predict_product_frames() (soxspipe.commonutils.data_organiser.data_organiser method) (soxspipe.commonutils.data_organiser.soxspipe.commonutils.data_organiser.data_organiser.data_organiser method) predict_product_path() (in module soxspipe.commonutils.toolkit) prepare() (soxspipe.commonutils.data_organiser.data_organiser method) (soxspipe.commonutils.data_organiser.soxspipe.commonutils.data_organiser.data_organiser.data_organiser method) prepare_frames() (soxspipe.recipes.base_recipe.base_recipe method) (soxspipe.recipes.base_recipe.soxspipe.recipes.base_recipe.base_recipe method) (soxspipe.recipes.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_disp_solution.soxspipe.recipes.soxs_disp_solution.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_mbias.soxs_mbias method) (soxspipe.recipes.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mdark.soxspipe.recipes.soxs_mdark.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_mflat.soxspipe.recipes.soxs_mflat.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_nod.soxspipe.recipes.soxs_nod.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_offset.soxs_offset method) (soxspipe.recipes.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_order_centres.soxspipe.recipes.soxs_order_centres.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_spatial_solution.soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_stare.soxspipe.recipes.soxs_stare.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_straighten.soxs_straighten method) (soxspipe.recipes.soxs_straighten.soxspipe.recipes.soxs_straighten.soxs_straighten.soxs_straighten method) print_memory_usage() (in module soxspipe.recipes.soxs_mflat) process_single_ab_nodding_cycle() (soxspipe.recipes.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_nod.soxspipe.recipes.soxs_nod.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_offset.soxs_offset method) produce_product() (soxspipe.recipes.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_disp_solution.soxspipe.recipes.soxs_disp_solution.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_mbias.soxs_mbias method) (soxspipe.recipes.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mdark.soxspipe.recipes.soxs_mdark.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_mflat.soxspipe.recipes.soxs_mflat.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_nod.soxspipe.recipes.soxs_nod.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_offset.soxs_offset method) (soxspipe.recipes.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_order_centres.soxspipe.recipes.soxs_order_centres.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_spatial_solution.soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_stare.soxspipe.recipes.soxs_stare.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_straighten.soxs_straighten method) (soxspipe.recipes.soxs_straighten.soxspipe.recipes.soxs_straighten.soxs_straighten.soxs_straighten method) Q qc_bias_structure() (soxspipe.recipes.soxs_mbias.soxs_mbias method) qc_median_flux_level() (soxspipe.recipes.base_recipe.base_recipe method) (soxspipe.recipes.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_disp_solution.soxspipe.recipes.soxs_disp_solution.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_mbias.soxs_mbias method) (soxspipe.recipes.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mdark.soxspipe.recipes.soxs_mdark.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_mflat.soxspipe.recipes.soxs_mflat.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_nod.soxspipe.recipes.soxs_nod.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_offset.soxs_offset method) (soxspipe.recipes.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_order_centres.soxspipe.recipes.soxs_order_centres.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_spatial_solution.soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_stare.soxspipe.recipes.soxs_stare.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_straighten.soxs_straighten method) (soxspipe.recipes.soxs_straighten.soxspipe.recipes.soxs_straighten.soxs_straighten.soxs_straighten method) qc_periodic_pattern_noise() (soxspipe.recipes.soxs_mbias.soxs_mbias method) qc_ron() (soxspipe.recipes.base_recipe.base_recipe method) (soxspipe.recipes.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_disp_solution.soxspipe.recipes.soxs_disp_solution.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_mbias.soxs_mbias method) (soxspipe.recipes.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mdark.soxspipe.recipes.soxs_mdark.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_mflat.soxspipe.recipes.soxs_mflat.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_nod.soxspipe.recipes.soxs_nod.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_offset.soxs_offset method) (soxspipe.recipes.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_order_centres.soxspipe.recipes.soxs_order_centres.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_spatial_solution.soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_stare.soxspipe.recipes.soxs_stare.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_straighten.soxs_straighten method) (soxspipe.recipes.soxs_straighten.soxspipe.recipes.soxs_straighten.soxs_straighten.soxs_straighten method) qc_settings_plot_tables() (in module soxspipe.commonutils.toolkit) quicklook_image() (in module soxspipe.commonutils.toolkit) R raw_frames_to_sof_map() (soxspipe.commonutils.data_organiser.data_organiser method) (soxspipe.commonutils.data_organiser.soxspipe.commonutils.data_organiser.data_organiser.data_organiser method) read_spectral_format() (in module soxspipe.commonutils.toolkit) reduce() (soxspipe.commonutils.reducer.reducer method) (soxspipe.commonutils.reducer.soxspipe.commonutils.reducer.reducer.reducer method) reducer (class in soxspipe.commonutils.reducer) refresh_database() (soxspipe.utKit.utKit method) report_output() (soxspipe.recipes.base_recipe.base_recipe method) (soxspipe.recipes.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_disp_solution.soxspipe.recipes.soxs_disp_solution.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_mbias.soxs_mbias method) (soxspipe.recipes.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mdark.soxspipe.recipes.soxs_mdark.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_mflat.soxspipe.recipes.soxs_mflat.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_nod.soxspipe.recipes.soxs_nod.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_offset.soxs_offset method) (soxspipe.recipes.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_order_centres.soxspipe.recipes.soxs_order_centres.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_spatial_solution.soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_stare.soxspipe.recipes.soxs_stare.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_straighten.soxs_straighten method) (soxspipe.recipes.soxs_straighten.soxspipe.recipes.soxs_straighten.soxs_straighten.soxs_straighten method) residual_merge() (soxspipe.commonutils.horne_extraction.horne_extraction method) (soxspipe.commonutils.horne_extraction.soxspipe.commonutils.horne_extraction.horne_extraction.horne_extraction method) response_function (class in soxspipe.commonutils.response_function) rolling_window_clipping() (soxspipe.commonutils.subtract_sky.soxspipe.commonutils.subtract_sky.subtract_sky.subtract_sky method) (soxspipe.commonutils.subtract_sky.subtract_sky method) run_recipe() (in module soxspipe.commonutils.reducer) run_recipe_bulk() (in module soxspipe.commonutils.reducer) S sample_trace() (soxspipe.commonutils.detect_continuum.detect_continuum method) (soxspipe.commonutils.detect_continuum.soxspipe.commonutils.detect_continuum.detect_continuum.detect_continuum method) select_sof_files_to_process() (soxspipe.commonutils.reducer.reducer method) (soxspipe.commonutils.reducer.soxspipe.commonutils.reducer.reducer.reducer method) session_create() (soxspipe.commonutils.data_organiser.data_organiser method) (soxspipe.commonutils.data_organiser.soxspipe.commonutils.data_organiser.data_organiser.data_organiser method) session_list() (soxspipe.commonutils.data_organiser.data_organiser method) (soxspipe.commonutils.data_organiser.soxspipe.commonutils.data_organiser.data_organiser.data_organiser method) session_refresh() (soxspipe.commonutils.data_organiser.data_organiser method) (soxspipe.commonutils.data_organiser.soxspipe.commonutils.data_organiser.data_organiser.data_organiser method) session_switch() (soxspipe.commonutils.data_organiser.data_organiser method) (soxspipe.commonutils.data_organiser.soxspipe.commonutils.data_organiser.data_organiser.data_organiser method) set_of_files (class in soxspipe.commonutils.set_of_files) setupModule() (soxspipe.utKit.utKit method) soxs_disp_solution (class in soxspipe.recipes.soxs_disp_solution) soxs_mbias (class in soxspipe.recipes.soxs_mbias) soxs_mdark (class in soxspipe.recipes.soxs_mdark) soxs_mflat (class in soxspipe.recipes.soxs_mflat) soxs_nod (class in soxspipe.recipes.soxs_nod) soxs_offset (class in soxspipe.recipes.soxs_offset) soxs_order_centres (class in soxspipe.recipes.soxs_order_centres) soxs_spatial_solution (class in soxspipe.recipes.soxs_spatial_solution) soxs_stare (class in soxspipe.recipes.soxs_stare) soxs_straighten (class in soxspipe.recipes.soxs_straighten) soxspipe module soxspipe.__version__ module soxspipe.cl_utils module soxspipe.commonutils module soxspipe.commonutils.combiner module soxspipe.commonutils.create_dispersion_map module soxspipe.commonutils.create_dispersion_map.create_dispersion_map.create_dispersion_map (class in soxspipe.commonutils.create_dispersion_map) soxspipe.commonutils.data_organiser module soxspipe.commonutils.data_organiser.data_organiser.data_organiser (class in soxspipe.commonutils.data_organiser) soxspipe.commonutils.detect_continuum module soxspipe.commonutils.detect_continuum.detect_continuum.detect_continuum (class in soxspipe.commonutils.detect_continuum) soxspipe.commonutils.detect_order_edges module soxspipe.commonutils.detect_order_edges.detect_order_edges.detect_order_edges (class in soxspipe.commonutils.detect_order_edges) soxspipe.commonutils.detector_lookup module soxspipe.commonutils.dispersion_map_to_pixel_arrays module soxspipe.commonutils.filenamer module soxspipe.commonutils.flux_calibration module soxspipe.commonutils.getpackagepath module soxspipe.commonutils.horne_extraction module soxspipe.commonutils.horne_extraction.horne_extraction.horne_extraction (class in soxspipe.commonutils.horne_extraction) soxspipe.commonutils.keyword_lookup module soxspipe.commonutils.polynomials module soxspipe.commonutils.reducer module soxspipe.commonutils.reducer.reducer.reducer (class in soxspipe.commonutils.reducer) soxspipe.commonutils.response_function module soxspipe.commonutils.response_function.response_function.response_function (class in soxspipe.commonutils.response_function) soxspipe.commonutils.set_of_files module soxspipe.commonutils.set_of_files.set_of_files.set_of_files (class in soxspipe.commonutils.set_of_files) soxspipe.commonutils.subtract_background module soxspipe.commonutils.subtract_sky module soxspipe.commonutils.subtract_sky.subtract_sky.subtract_sky (class in soxspipe.commonutils.subtract_sky) soxspipe.commonutils.toolkit module soxspipe.commonutils.uncompress module soxspipe.recipes module soxspipe.recipes.base_recipe module soxspipe.recipes.soxs_disp_solution module soxspipe.recipes.soxs_disp_solution.soxs_disp_solution.soxs_disp_solution (class in soxspipe.recipes.soxs_disp_solution) soxspipe.recipes.soxs_mbias module soxspipe.recipes.soxs_mdark module soxspipe.recipes.soxs_mdark.soxs_mdark.soxs_mdark (class in soxspipe.recipes.soxs_mdark) soxspipe.recipes.soxs_mflat module soxspipe.recipes.soxs_mflat.soxs_mflat.soxs_mflat (class in soxspipe.recipes.soxs_mflat) soxspipe.recipes.soxs_nod module soxspipe.recipes.soxs_nod.soxs_nod.soxs_nod (class in soxspipe.recipes.soxs_nod) soxspipe.recipes.soxs_offset module soxspipe.recipes.soxs_order_centres module soxspipe.recipes.soxs_order_centres.soxs_order_centres.soxs_order_centres (class in soxspipe.recipes.soxs_order_centres) soxspipe.recipes.soxs_spatial_solution module soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution.soxs_spatial_solution (class in soxspipe.recipes.soxs_spatial_solution) soxspipe.recipes.soxs_stare module soxspipe.recipes.soxs_stare.soxs_stare.soxs_stare (class in soxspipe.recipes.soxs_stare) soxspipe.recipes.soxs_straighten module soxspipe.recipes.soxs_straighten.soxs_straighten.soxs_straighten (class in soxspipe.recipes.soxs_straighten) soxspipe.utKit module spectroscopic_image_quality_checks() (in module soxspipe.commonutils.toolkit) stack_extractions() (soxspipe.recipes.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_nod.soxspipe.recipes.soxs_nod.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_offset.soxs_offset method) stitch_uv_mflats() (soxspipe.recipes.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_mflat.soxspipe.recipes.soxs_mflat.soxs_mflat.soxs_mflat method) straighten_mph_sets() (in module soxspipe.commonutils.create_dispersion_map) subtract() (soxspipe.commonutils.subtract_background.subtract_background method) (soxspipe.commonutils.subtract_sky.soxspipe.commonutils.subtract_sky.subtract_sky.subtract_sky method) (soxspipe.commonutils.subtract_sky.subtract_sky method) subtract_background (class in soxspipe.commonutils.subtract_background) subtract_mean_flux_level() (soxspipe.recipes.base_recipe.base_recipe method) (soxspipe.recipes.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_disp_solution.soxspipe.recipes.soxs_disp_solution.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_mbias.soxs_mbias method) (soxspipe.recipes.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mdark.soxspipe.recipes.soxs_mdark.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_mflat.soxspipe.recipes.soxs_mflat.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_nod.soxspipe.recipes.soxs_nod.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_offset.soxs_offset method) (soxspipe.recipes.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_order_centres.soxspipe.recipes.soxs_order_centres.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_spatial_solution.soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_stare.soxspipe.recipes.soxs_stare.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_straighten.soxs_straighten method) (soxspipe.recipes.soxs_straighten.soxspipe.recipes.soxs_straighten.soxs_straighten.soxs_straighten method) subtract_sky (class in soxspipe.commonutils.subtract_sky) T tab_complete() (in module soxspipe.cl_utils) tearDownModule() (soxspipe.utKit.utKit method) twoD_disp_map_image_to_dataframe() (in module soxspipe.commonutils.toolkit) U uncompress() (in module soxspipe.commonutils.uncompress) unpack_order_table() (in module soxspipe.commonutils.toolkit) update_fits_keywords() (soxspipe.recipes.base_recipe.base_recipe method) (soxspipe.recipes.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_disp_solution.soxspipe.recipes.soxs_disp_solution.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_mbias.soxs_mbias method) (soxspipe.recipes.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mdark.soxspipe.recipes.soxs_mdark.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_mflat.soxspipe.recipes.soxs_mflat.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_nod.soxspipe.recipes.soxs_nod.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_offset.soxs_offset method) (soxspipe.recipes.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_order_centres.soxspipe.recipes.soxs_order_centres.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_spatial_solution.soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_stare.soxspipe.recipes.soxs_stare.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_straighten.soxs_straighten method) (soxspipe.recipes.soxs_straighten.soxspipe.recipes.soxs_straighten.soxs_straighten.soxs_straighten method) update_static_line_list_detector_positions() (soxspipe.commonutils.create_dispersion_map.create_dispersion_map method) (soxspipe.commonutils.create_dispersion_map.soxspipe.commonutils.create_dispersion_map.create_dispersion_map.create_dispersion_map method) use_vlt_environment_folders() (soxspipe.commonutils.data_organiser.data_organiser method) (soxspipe.commonutils.data_organiser.soxspipe.commonutils.data_organiser.data_organiser.data_organiser method) utility_setup() (in module soxspipe.commonutils.toolkit) utKit (class in soxspipe.utKit) V verify_input_frames() (soxspipe.recipes.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_disp_solution.soxspipe.recipes.soxs_disp_solution.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_mbias.soxs_mbias method) (soxspipe.recipes.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mdark.soxspipe.recipes.soxs_mdark.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_mflat.soxspipe.recipes.soxs_mflat.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_nod.soxspipe.recipes.soxs_nod.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_offset.soxs_offset method) (soxspipe.recipes.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_order_centres.soxspipe.recipes.soxs_order_centres.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_spatial_solution.soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_stare.soxspipe.recipes.soxs_stare.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_straighten.soxs_straighten method) (soxspipe.recipes.soxs_straighten.soxspipe.recipes.soxs_straighten.soxs_straighten.soxs_straighten method) W weighted_average() (soxspipe.commonutils.horne_extraction.horne_extraction method) (soxspipe.commonutils.horne_extraction.soxspipe.commonutils.horne_extraction.horne_extraction.horne_extraction method) write_map_to_file() (soxspipe.commonutils.create_dispersion_map.create_dispersion_map method) (soxspipe.commonutils.create_dispersion_map.soxspipe.commonutils.create_dispersion_map.create_dispersion_map.create_dispersion_map method) write_order_table_to_file() (soxspipe.commonutils.detect_continuum.detect_continuum method) (soxspipe.commonutils.detect_continuum.soxspipe.commonutils.detect_continuum.detect_continuum.detect_continuum method) (soxspipe.commonutils.detect_order_edges.detect_order_edges method) (soxspipe.commonutils.detect_order_edges.soxspipe.commonutils.detect_order_edges.detect_order_edges.detect_order_edges method) write_response_function_to_file() (soxspipe.commonutils.response_function.response_function method) (soxspipe.commonutils.response_function.soxspipe.commonutils.response_function.response_function.response_function method) X xsh2soxs() (soxspipe.recipes.base_recipe.base_recipe method) (soxspipe.recipes.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_disp_solution.soxspipe.recipes.soxs_disp_solution.soxs_disp_solution.soxs_disp_solution method) (soxspipe.recipes.soxs_mbias.soxs_mbias method) (soxspipe.recipes.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mdark.soxspipe.recipes.soxs_mdark.soxs_mdark.soxs_mdark method) (soxspipe.recipes.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_mflat.soxspipe.recipes.soxs_mflat.soxs_mflat.soxs_mflat method) (soxspipe.recipes.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_nod.soxspipe.recipes.soxs_nod.soxs_nod.soxs_nod method) (soxspipe.recipes.soxs_offset.soxs_offset method) (soxspipe.recipes.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_order_centres.soxspipe.recipes.soxs_order_centres.soxs_order_centres.soxs_order_centres method) (soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_spatial_solution.soxspipe.recipes.soxs_spatial_solution.soxs_spatial_solution.soxs_spatial_solution method) (soxspipe.recipes.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_stare.soxspipe.recipes.soxs_stare.soxs_stare.soxs_stare method) (soxspipe.recipes.soxs_straighten.soxs_straighten method) (soxspipe.recipes.soxs_straighten.soxspipe.recipes.soxs_straighten.soxs_straighten.soxs_straighten method)